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weiyuqing committed 2023-03-18 18:40:52 +08:00
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@@ -1,7 +1,9 @@
<?xml version="1.0" encoding="UTF-8"?> <?xml version="1.0" encoding="UTF-8"?>
<module type="PYTHON_MODULE" version="4"> <module type="PYTHON_MODULE" version="4">
<component name="NewModuleRootManager"> <component name="NewModuleRootManager">
<content url="file://$MODULE_DIR$" /> <content url="file://$MODULE_DIR$">
<sourceFolder url="file://$MODULE_DIR$" isTestSource="false" />
</content>
<orderEntry type="jdk" jdkName="ECG_by_Diffenert_CNN_Test" jdkType="Python SDK" /> <orderEntry type="jdk" jdkName="ECG_by_Diffenert_CNN_Test" jdkType="Python SDK" />
<orderEntry type="sourceFolder" forTests="false" /> <orderEntry type="sourceFolder" forTests="false" />
</component> </component>
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@@ -6,11 +6,11 @@ import pywt
import wfdb import wfdb
import tensorflow as tf import tensorflow as tf
from tensorflow import keras from tensorflow import keras
from utils import loadData, plot_history_tf, plot_heat_map from utils_oneLayerCNN import loadData, plot_history_tf, plot_heat_map
#from ECG_read_weiyuqing_without_wfdb import ECGDATAPATH #from ECG_read_weiyuqing_without_wfdb import ECGDATAPATH
#PATH of this test #PATH of this test
Project_PATH = "./Number-Of-CNN-Layers/One/" Project_PATH = "../Number-Of-CNN-Layers/One/"
#PICTUREPATH= Project_PATH + "picture/" #PICTUREPATH= Project_PATH + "picture/"
log_dir = Project_PATH + "logs/" + datetime.datetime.now().strftime("%Y%m%d-%H%M%S") log_dir = Project_PATH + "logs/" + datetime.datetime.now().strftime("%Y%m%d-%H%M%S")
model_Path_one = Project_PATH + "model/ecg_model_one_layer.h5" model_Path_one = Project_PATH + "model/ecg_model_one_layer.h5"
@@ -1,5 +1,5 @@
# this file give # this file give
import os
import wfdb import wfdb
import pywt import pywt
@@ -10,13 +10,13 @@ from sklearn.metrics import confusion_matrix
from sklearn.model_selection import train_test_split from sklearn.model_selection import train_test_split
# from _mian_tensorflow import Project_PATH # from _mian_tensorflow import Project_PATH
Project_PATH = "./Number-Of-CNN-Layers/Two/" Project_PATH = '../Number-Of-CNN-Layers/One/'
PICTUREPATH = Project_PATH + 'picture/' PICTUREPATH = Project_PATH + 'picture/'
# from ECG_read_weiyuqing_without_wfdb import ECGDATAPATH # from ECG_read_weiyuqing_without_wfdb import ECGDATAPATH
MITBITECGDATAPATH='./MIT-BIT/' MITBITECGDATAPATH = '../MIT-BIT/'
# wavelet denoise preprocess using mallat algorithm # wavelet denoise preprocess using mallat algorithm
@@ -92,7 +92,6 @@ def loadData(ratio, random_seed):
# print(X_train, X_test, y_train, y_test) # print(X_train, X_test, y_train, y_test)
return X_train, X_test, y_train, y_test return X_train, X_test, y_train, y_test
# train_ds = np.hstack((dataSet, labelSet)) # train_ds = np.hstack((dataSet, labelSet))
# np.random.shuffle(train_ds) # np.random.shuffle(train_ds)
# #
@@ -114,7 +113,7 @@ def plot_heat_map(y_test, y_pred):
# normalize # normalize
# con_mat_norm = con_mat.astype('float') / con_mat.sum(axis=1)[:, np.newaxis] # con_mat_norm = con_mat.astype('float') / con_mat.sum(axis=1)[:, np.newaxis]
# con_mat_norm = np.around(con_mat_norm, decimals=2) # con_mat_norm = np.around(con_mat_norm, decimals=2)
# os.remove(PICTUREPATH+'confusion_matrix.png')
# plot # plot
plt.figure(figsize=(8, 8)) plt.figure(figsize=(8, 8))
seaborn.heatmap(con_mat, annot=True, fmt='.20g', cmap='Blues') seaborn.heatmap(con_mat, annot=True, fmt='.20g', cmap='Blues')
@@ -127,6 +126,9 @@ def plot_heat_map(y_test, y_pred):
def plot_history_tf(history): def plot_history_tf(history):
# os.remove(PICTUREPATH+'accuracy.png')
# os.remove(PICTUREPATH+'loss.png')
plt.figure(figsize=(8, 8)) plt.figure(figsize=(8, 8))
plt.plot(history.history['accuracy']) plt.plot(history.history['accuracy'])
plt.plot(history.history['val_accuracy']) plt.plot(history.history['val_accuracy'])
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